Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTD-SKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ---QLK--A--ANSYVTGPLFLSVGDTLFGKS-GE-DAKGTNWGNEAGVSVLKWIADQKKNDGFVNL-TAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAA-YLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 3DM0 Chain:A ((3-371)) | -----------------------------------EEGKLVIWINGDKGYNGLAEVGKKFEKD-TGIKVTVEH--PDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAA--FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPN-PPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS-A-VNYGVTVLPTFKG-QP---SKPFVGVLSAGINAASP-----NKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEE-LAKDPRIAATMEN---AQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAGLVLK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25991 for 3097 contacts (-8.4/contact) +
2D Compatibility (PS) -38036 + (NN) -11504 + (LL) 2844
1D Compatibility (HY) -12000 + (ID) 4100
Total energy: -88787.0 ( -28.67 by residue)
QMean score : 0.396
|
|
|