Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVVLVTGCASGIGYAQAQYFLKQGYQVYGVDKSDKP-----NLNGNFNF----------IKLDLSSDLSPLFTMVPTVDILCNTAGILDAYKPLLEVSDEELEHLFDINFFVTVRLTRHYLRRMVEKKSGIIINMCSIASFIAGGGGAAYTSSKHALAGFTRQLALDYAKDCIQIFGIAPGAVQTAMTASDFEPGGLAEWVASETPIGRWTKPSEVAELTGFLASGKARSMQGEIVKIDGGWSLK
2C07 Chain:A ((44-284))
-NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD-NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISS-----ISEQ--IKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLSP-
General information:
TITO was launched using:
RESULT:
Template:
2C07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137286 for 1784 contacts (-77.0/contact) +
2D Compatibility (PS) -23983 + (NN) -8991 + (LL) 652
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -186958.0 ( -104.80 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2C07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C07-query.scw
PDB file :
Tito_Scwrl_2C07.pdb
: