Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLHLDYE-AYEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIVKENGGKGDALNMGINAANYDYFLCLDADSM-LQVDSLSQISKSIQVDPTVIAVGGLV----QVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGA-RIFLDYLRANLIISGAFGLFKKDLVKAVG----------GYDTQTLGEDMELVMKLHFFCRNNNIPYRICYE-------TDAVCWSQAPTNLGDLRKQRRR |
| 3CKJ Chain:A ((15-329)) | --------------------GLRDTRPGDTWLADRSWNRPGWTVAELEAAKAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGA----------------------RVVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPGRVTELVARPLLAALRPELGCILQPLGGEYAATRELLTSVPFAPGYGVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRPLAELGAMSRQVIATLLSRCGIPDSGVGLTQFVADGPEGQSYTQHTWPVSLADRPPMQAIRPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117781 for 2336 contacts (-50.4/contact) +
2D Compatibility (PS) -28611 + (NN) 107 + (LL) 4912
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -151023.0 ( -64.65 by residue)
QMean score : 0.294
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