Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDITTKQISFHEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIE----GGIPVVSIPGASAGITALIASGLAP-QPHIFYGFLPRKKG--QQITFFETKKDYPETQIFYESPF-----RVSDTLKHMKEIYG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
| 3NUT Chain:A ((8-238)) | ------------SGWVTVAGLGPGREDLVTPEVTAALAEATDIVGYI-PYVARIAPREGL--TLHPTDNRVELDRATHALEMAAEGRRVVVVS-SGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCAINLSDNLKPFEILEKRLRHAARGDFAMAFYNPRSKSRPHQFTRVLEILREECEPGRLILFARAVTTPEQAISVVELRDATPEM----ADMRTVVLVGNAATRRVGPWVYTPR---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115403 for 1728 contacts (-66.8/contact) +
2D Compatibility (PS) -23809 + (NN) -12449 + (LL) 3972
1D Compatibility (HY) 0 + (ID) 1650
Total energy: -149339.0 ( -86.42 by residue)
QMean score : 0.491
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