Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIRKLVVMSDSHGDRDIVKDIKNHYL--GKVDAIFHNGDSELPSSD-----PIW---EGIHVVTGNCDYDSGY----------PE-----------------V-------LV----TKIDNTVIVQTHGHLHQINFT-------WDKLDLLAQQEDADICLYGHLHRADAWK-NGKTIFINPGSVLQPRGP------INEKLYAVVTITDS-KVLVEYYTRQHQPYPNLTKEFSR |
| 3QFM Chain:A ((11-230)) | --MTKIALLSDIHGNTTALEAVLA-DARQLGVDEYWLLGDILMPGTGRRRILDLLDQLPITARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRVDYDVAAELQLAKDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64454 for 1215 contacts (-53.0/contact) +
2D Compatibility (PS) -17072 + (NN) -6177 + (LL) 396
1D Compatibility (HY) -3200 + (ID) 1650
Total energy: -92157.0 ( -75.85 by residue)
QMean score : 0.381
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