Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRMIPGRIRNQGIEL-YEQGLVSLISQEGNLLKAKVGDCQIEYSLVTEETKCSCDFFARKGYCQHLAALEHFLKNDPEGKAILSKVQVQQESQQETKKKTSFGSVFLDSLIINEDDTIKYQLSAQGEQNPYANDIWWTLKIRRLPDDRSYVIRDIKAFLNTVRKEAYYQIGKQYFETLSLIQ----FDETSQELIEFLWRLIPSHSSKIDLEFILPNQGRHL---SLTRGFFEEGVTLMNALENFSFESDFHQFNHLYFKELEGEDHLYQFKVIVHRQSIELEIKEKDLKPLFANSYLFYRDTFYHLNLKQEKMVTAIRSLPIEGDLAKHIHFDLDDQDKLAAHLLDFKEIGLVDAPRSFSIHDFKVNFEFDINSQNEILLQMVFD-YGNDLTVHNRQELEQLTFASHFKHEEKIFKLLERYGFAPHFSTSHPAYSAQELYDFYTYMLPQFKKMGTVSLSAKLESYRLIERPQID-------IEAKGSLLDISFDFSDLLENDVDQALVALFDNNPYFVNKSGQLVIFDEETKKVSATL-QGLRARRAKNGHIELDNIAAFQLSELFANQDNVSFSQHFYQLIEDLRHPEKFKIPGLSVSASLRDY-QLTGVRWLSMLDHYGFAGILADDMGLGKTLQTISFLSTKLTRDSRVLILSPSSLIYNWQDEFHKFAPDVDVAVAYGSKIRRDEIIAERHQVIITSYSSFRQ--DFETYSEGNYDYLILDEAQVMKNAQTKIAHSLRSFEVKNCFALSGTPIENKLLEIWSIFQIILPGLLPGKKEFLKLNPKQVARYIKPFVMRRRKEEVLPELPDLIEMNYPNEMTDSQKVIYLAQLRQIQESIQHSSDADLNRRKIEILSGITRLRQICDTPRLFMDYDGESGKLESLHQLLTQIKENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLTGADTVVLIDLWWNPAVEMQAISRAHRLG--QKENVEVYRLITRGTIEEKILEMQETKKHLVTTVLDGNETHASMSVDDIREILGVSK |
| 4WZ9 Chain:A ((40-926)) | QAVDERYRLPTTSIPIHYDLHLRTEIHRNERTFTGTVG---IQLQVVQATDKLVMH---NRGLVMSSAKVSSLPNGVTGAPTLIGDVQYSTD--------TTFEHITFTSPTILQPGTYLLEVAFQGRLAT---------------NDDGFYVSSYVADNGERRYLATTQ-----FESTSARMAFPCYDEPG---LKATFTVSITHSLSYKAISNMPQKTTTDIETDMRTTFFEKTPAMSTYLLAFVVSD--------FQLRLSGAQRVYV------RPNAFNEA-----TFALEAGVKILKVLDDHLGIPYDTYMPKLDQIAIP---------DFAAGAMENWGLVTYREQALLFNPAVST-------YRGKTNVATTIAHEYAHQWFGNLVSP---------------EWWEYIW-LNEGFATLYEFYALDMAYPGQEYWELFNQQVIQYAMGQDGQASTRPMNWNAATPGEISALFDRVAYDKSGSVLNMMRHVLG--DDNWKAGLKAYLTDRALQGAVDEQLYAGLQSAIEGKGVLPNGVTVAQIMRTWTNEAGYPVLNVRRSY-DTGDVIISQERFYNDRKVPNTNIWMIPYNYVHQAKADFNEFDDFQWLATKAARIETTVPANEW-IVFNKQQVGYY--RVNYDEHNWELITNALHENWA-SIH--------------RLNRAQLIDDAYWLARSGRLDLRVALRFMTYLRNEREYAPWTAANV---ALTYFNNRLRGTAEYHNFLIFVDALIEDIYSLLTI-----DAVSPDDTLLHKYLVQTISTWACSMGYTDCLMKTAALLKAEASGTGPAVHPDIASVTYCYGMRS-----ALESEFQYLYRKMMNSKNLAERTMLIDSL-------GCSNNKEFLKAFLTT--------------------------ALGSINYR------ADERRRVVQAIYSGGRTGVDALIEF------LMDPALVNEFVSTLSTSTLNSALSAIASRTNNVEEMNKLNALITA--LGSRV--NSQTAANLRTTAQANLDWVNGFEGLMLSNFLAEA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55321 for 7404 contacts (-7.5/contact) +
2D Compatibility (PS) -88031 + (NN) 7318 + (LL) 12864
1D Compatibility (HY) -26400 + (ID) 7400
Total energy: -156970.0 ( -21.20 by residue)
QMean score : 0.132
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