Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTQFLGEFLGTFILVLLGDGVVAGNVLSKTKEEGT--GWTAIVFGWGIACTVAVYVSGLFSP-AHLNPAVTLAMASIGAIS-WGQVIPFIIAQMLGAMVAATILWLHYYPHWKETKDSGLILASFSTGPAI-----------RHTPSNLLGEIIGTAILVITIMAIG---PSKVAAGLGPIIVGIVIFAVGFSLGPTTGYAINPARDLGPRLMHAILPIENK---GDSDWSYAWIPVVGPIIGGVLGAILYNIALTLI- |
| 1FX8 Chain:A ((6-259)) | TLKGQCIAEFLGTGLLIFFGVGCVAALKVA-----GASFGQWEISVIWGLGVAMAIYLTAGVS-GAHLNPAVTIALWLFAC-FDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187374 for 1937 contacts (-96.7/contact) +
2D Compatibility (PS) -23301 + (NN) -824 + (LL) 452
1D Compatibility (HY) -24400 + (ID) 3900
Total energy: -239347.0 ( -123.57 by residue)
QMean score : 0.274
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