Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGKVNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK
4DXE Chain:B ((25-140))
MIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTG---VAFNDIDCYND---KPKIDYEGF--IVHVSISHTEHYAMSQVVLEKS-
General information:
TITO was launched using:
RESULT:
Template:
4DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49677 for 795 contacts (-62.5/contact) +
2D Compatibility (PS) -11917 + (NN) -5803 + (LL) -236
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -80183.0 ( -100.86 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_4DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DXE-query.scw
PDB file :
Tito_Scwrl_4DXE.pdb
: