Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATVKTNTDIFEQAWEGFKGVDWKEKASIARFVQANYAPYDGDESFLAGATERSLHIKKVIEETKAHYEETRFPMDT--RVASISELPAGFIDKDSELIFGIQNDELFKLNFMPKGGIRMAETTLKE------NGYEPDPAVH----EIFTKY-ATTVNDGIFRAYTSNIRRARHAHTV-TGLPDAYSRGRIIGVYARLAVYGADYLMQEKVNDWNAL---N-----D---------IDEESIR-------LREEINLQ---YQALGEVVKLGDLYGVDVRKPAMNTKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFVDDFVLKLRTVKFARTKAYDALYSGDPTFITTSMAGMGADGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWSDQLPYAFRRYCMSMSHK-HSSIQYEGVSTMAKEGY--------GEMSCISCCVSPLDPENEDKRHNLQY-FGARVNVMKALLTGLNGGYDDVHKDYKVFDIDPIRDEVLNFDTVKANFEKSLDWLTDTYVDAMNIIHYMTDKYNYEAVQMAFLPSHVRANMG----------FG--ICGFANTVDSLSAIKYATVKPIRDE---------DGYIYDYET-------VGDFPRYGEDDDRVDSIAEWLLEAFHGRLAKHKLYKDAEATVSLLTITSNVAYSKQTGNSPVHKGVYLNEDGSVNLSKVEFFSPGANPSNK-AKGGWLQNLNSLSKLDFAHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFENGGQHVNLNVMDLKDVYDKIMNGED---VIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDALTN |
| 1R9D Chain:A ((37-787)) | --------------------------------------------------------------ESFKQTEGQPAILRRALALKHILENIPITIR-DQELIVGSLTKEPRSSQVFPEFSNKWLQDELDRLNKRTGDAFQISEESKEKLKDVFEYWNGKTTSELATSYMTEETREAVNCDVFTVGNYYYNGVGHVSVDYGKVLRVGFNGIINEAKEQLEKNRSIDPDFIKKEKFLNSVIISCEAAITYVNRYAKKAKEIADNTSDAKRKAELNEIAKICSKVSGEGAKSFYEACQLFWFIHAIINIESNGHSISPARFDQYMYPYYENDK---NITDKFAQELIDCIWIKLNDINKVRDEISTKHFGGYPMYQNLIVGGQNSEGKDATNKVSYMALEAAVHV-KLPQPSLSVRIWNKTPDEFLLRAAELTREGLGLPAYYNDEVIIPALVSRGLTLEDARDYGIIGCVEPQ--KP---GKTEGWHDSAFFNLARIVELTINSGFD--KNKQIGPKTQNF-EEMKSFDEFMKAYKAQMEYFVKHMCCADNCIDIAHAERAPLPFLSSMVDNCIGKGKSLQDGGAEYNFSGPQGVGVANIGDSLVAVKKI----VFDENKITPSELKKTLNNDFKNSEEIQALLKNAPKFGNDIDEVDNLAREGALVYCREVNKYTNPRGGNFQPGLYPSSINVYFGSLTGATPDG------------RKSGQPLADGVSPSRGCDVSGPTAACNSVSKLDHFIASNGTLFNQKFHPSALKGD--NGLMNLSSLIRSYFDQKGFHVQFNVIDKKILLAAQKNPEKYQDLIVRVAGYSAQFISLDKSIQNDIIARTEHVM--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246021 for 5999 contacts (-41.0/contact) +
2D Compatibility (PS) -71265 + (NN) -28564 + (LL) 5632
1D Compatibility (HY) -10000 + (ID) 6800
Total energy: -357018.0 ( -59.51 by residue)
QMean score : 0.407
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