Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEITWTVKYITEFIATAFLIILGNGAVANVDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL |
| 3CN5 Chain:A ((34-264)) | --LWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGG-------ANSVALG-Y-------NKGTALGAEIIGTFVLVYTVFSATDPKRSARD----------------------SHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNS-----------NKVWDDQWIFWVGPFIGAAVAAAYHQYVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155862 for 2085 contacts (-74.8/contact) +
2D Compatibility (PS) -24106 + (NN) -5904 + (LL) 3440
1D Compatibility (HY) -16400 + (ID) 2750
Total energy: -201582.0 ( -96.68 by residue)
QMean score : 0.292
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