Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKERELRRTMAVFPIGTVMKLTDLTARQIRYYEDQGLITPE-RTEGNRRMFSLNDMDRLLEIKDFISDGLHISDIKNEYMQRQHKSKEKQKSLSDAEVRRLLQDELRNQGRFSSPSQHIGNMHL
3HH0 Chain:A ((1-75))
----------LAWLISEFASVGDVTVRALRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGFSLGEIQNIILQRDIETEVFLRQMHFQREVLLAEQERIAKVLSHMDEMTKKFQKE
General information:
TITO was launched using:
RESULT:
Template:
3HH0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38188 for 463 contacts (-82.5/contact) +
2D Compatibility (PS) -7858 + (NN) -1636 + (LL) 1216
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -53966.0 ( -116.56 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3HH0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HH0-query.scw
PDB file :
Tito_Scwrl_3HH0.pdb
: