Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYYLSIDYGGTNTKALIFDKLGHQIAVSSFETLK-NETQSGHRQVNLVKTWNAITSAIREVIQISK-LSPEQISAVACIGHGKGLYLLDN-KLEPLEQGILSTDNRAKDLAQYFESK-L-DNIWELTRQHIFPSQSPVILRWLKDYQPETYKSIG----AVLSAKDFIRYKLTGK--VQQEYGDASGNHWINFQTGTYDPAILDFFGIREIENSLPELIDSADLVPGGISSQAAKETGLVEGTPVVGGLFDIDACALGSGVLESDTFSVISGTWNINTYPSLKPA--K--QDSGLMTSY-FPDRRYLLEASSPTSAGNLNFMLKMLMHQEIDNAKSSGGSIYDNLEEFLTHTDATHHGLIFFPFLYGSNT---SQDASACFFGLTTKSTKSQMIRAVYEGIAFAHKQHITDLIKSRGSVPKIIRFSGGATNSPAWMQMFSDILNFPIETVEGTELGGLGGAILARHALDKISLKEAVQDMVRVKAIYKPQLSEVKGYKKKYHAYQKLLETLDPIWSELGHLNK |
2DPN Chain:A ((3-490)) | --FLLALDQGTTSSRAILFTLEGR-PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVL-RRAGAEAGEVLALGITNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGGKVHATDPTNASRTLLFNLHTLAWDPELLEALGIPA--ALLPEVRPSDGDF-GETLPE---LLGA--PVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVAGAAVGWLKEVG---LIR--------ESAEVEALAAS-VEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGALSPEDVAG-RFREAERFLPTMP-EGRREALYRRWREAVERAKGWARE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203050 for 4420 contacts (-45.9/contact) +
2D Compatibility (PS) -49855 + (NN) -16301 + (LL) 1908
1D Compatibility (HY) -10000 + (ID) 4950
Total energy: -282248.0 ( -63.86 by residue)
QMean score : 0.461
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