Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADVKVVNNEDSRGQKQDLKAKLFHIKIGSVPLPVYVCLALLILLAGFLQKLPVNMLGGFAVILTMGWFLGTIGASIPGFKNFGGPAILSLLVPSILVFFNLINKNVLESTNMLMKQANFLYFYIACLVSGSILGMNRKMLIQGLLRMIFPMLLGMVCAMMVGTFVGVILGLEW--RHTLFYIVTPVLAGGIGEGILPLSLGYSSITGVASEQLV-AQLIPATIIGNFFAILCTALLNRLGEKKPHLSGQGQLVRLNKGEDMSDIIADHSGPIDVKKMGGGVLTACSLFIFGHLLQQLTGFPGPVLMIVAAAILKYINVIPRETQNGAKQLYKFISGNFTFPLMAGLGLLYIPLKDVVATLSIQYFIVVISVVFTVISVGFFVSRFLNMNPVEAGIISACQSGMGGTGDVAILSTADRMNLMPFAQVATRLGGAITVITMTAILRMLF |
2P4E Chain:A ((259-318)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------GTVSGTLIGLEFIRKSQLVQPVGPLVV------LLPLAGGYSRVLNAACQRLARAGVVLVTAAGNF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29614 for 284 contacts (-104.3/contact) +
2D Compatibility (PS) -6168 + (NN) -816 + (LL) 29608
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -12090.0 ( -42.57 by residue)
QMean score : 0.007
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