Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYTIEELVEQANSQHKGNIAELMIQTEIEMT---GRSREEIRYIMSRNLEVMKASVI---DGLTPSKSISGLTGGDAVKMDQYLQSGKTISDTTILAAVRNAMAVNELNAKMGLVCATPTAGSAGCLP--------AVISTAIEKLNLTEEEQLDFLFTA--------GAFGLVIGNNASISGAEGGCQAE--------------VGSASAMAAAALVMAAGGTPFQ---ASQAIAFVIKNMLGLICDPVA-----GLVEVPCVKRNALGSSFALVAADMALAGIESQIPVDEVIDAMYQVGSSLPTAFRETAEGGLAATPTGRRYSKEIFGE |
3J6V Chain:I ((68-396)) | -SYTVDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDVDRAITYLFPSGLFEKRARPIMKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKVLHAEERQDQLRAKGLFSEKSKSKDLIGSRWLIKEELEEMLVEKLSDQDYAQFIRLLERLSALPCDAAEEEFVGRFRRTVTVQSKKHLIEPLQYDEQGMAFSTGQGKRKTANAEAVVYGHGSGKIEINGVDYLLYFPVTQDREQLMFPFHFLDRLGKHDVTCTVSGG-GRSSQAGAIRLAMSRALCSFITEDEVEWMRQAGL-LTTDPRVRERKKPGQEGARRKFTWKKR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42818 for 2020 contacts (-21.2/contact) +
2D Compatibility (PS) -29676 + (NN) -6341 + (LL) 288
1D Compatibility (HY) 1200 + (ID) 2350
Total energy: -79697.0 ( -39.45 by residue)
QMean score : 0.236
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