Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNN---KTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADIED-NFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NRMAFEPRHKVLAFDYTQTYENITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAFA----HSLL-----FTEIREKQGLAYTIGSQFDS--FTGLFTIYAGIDKE-NRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLASDNP--KVIVDHIYHEHY-LDQFHTSALFIDKVDDVTKSDIVSVATKLKLQAFYFLEGN |
| 3CX5 Chain:A ((4-409)) | TQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENS--------AVAAK-EGLALSSNISRD----FQSYIVSSLPG--------STDKSLDFLNQSFIQQK--ANLLSSSNFEATKKSVLKQVQDFEDNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLR-DDTLPKAWISLAVEGEPV-NSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEY-QLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLT-ISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170558 for 3120 contacts (-54.7/contact) +
2D Compatibility (PS) -41532 + (NN) -14183 + (LL) 2440
1D Compatibility (HY) -4400 + (ID) 2900
Total energy: -231133.0 ( -74.08 by residue)
QMean score : 0.426
|
|
|