Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNLRNRLSGVNGKNKRVKEKEQKIWSEIGMIAGAFALLDVIIRGIMFEFPFKEWAASLVFLFIIILYYCIRAAASGMLMPRIDTKEELQKRVKQQRIESIAVAFAVVVLTMYDRGIPHTFFAWLKMILLFIVCGGVLFLLRYVIVKLAYRRAVKEEIKKKSSFLFGKRGKRSQFRAAFFIGTLICIHSAKLF
4HKR Chain:A ((12-202))--------TYLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVEVQMLIAFAICTTLLVAVHMLALMISTCILP----------NPHERLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYRSLVSHKYEVTVSGIRELEMLKEQMEQDHLEHH----------


General information:
TITO was launched using:
RESULT:

Template: 4HKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 412 -66251 -160.80 -401.52
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -160.80
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.179

(partial model without unconserved sides chains):
PDB file : Tito_4HKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HKR-query.scw
PDB file : Tito_Scwrl_4HKR.pdb: