Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTNMSGGRRSMPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQKNLQEQNNT---------
1BW5 Chain:A ((1-66))MKTT--RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMK


General information:
TITO was launched using:
RESULT:

Template: 1BW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 104 -5440 -52.30 -95.43
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -52.30
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_1BW5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BW5-query.scw
PDB file : Tito_Scwrl_1BW5.pdb: