Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNINVDVKQNENDIQVNIAGEIDVYSAPVLREKLVPLAE-Q-GADLRICLKDVSYMDSTGLGVFVGTFKMVKKQGGSLKLENLSERLIRLFDITGLKDIIDISAKSEGGVQ
2KA5 Chain:A ((12-120))--HMFPYKIVDDVVILMPNKELNIENAHLFKKWVFDEFLNKGYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALVSPNEKVERVLSLTNLDRIVKIYDTISEAME


General information:
TITO was launched using:
RESULT:

Template: 2KA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 451 -83692 -185.57 -782.17
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -185.57
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_2KA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KA5-query.scw
PDB file : Tito_Scwrl_2KA5.pdb: