Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDEFTIGQVFKTK-SLKVSKDDIMRFAGE-FDPQYMHVDEEKASKGRFNGIIASGIQTLAISFKLWIEEGFYG------DDIIAGTEMNHMTFIKPVYPDDELFTIVEVLDKQPKRNELGILTVLLSTYNQKEVKVFEGELSVLIKR
4RLJ Chain:A ((3-145))--LSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYKAQAA--FFKHANIATAEAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVRE-AHGTQIIVTKNIVTNEEGDLVQETYTTLAGR-


General information:
TITO was launched using:
RESULT:

Template: 4RLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 604 -72882 -120.67 -539.87
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -120.67
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_4RLJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RLJ-query.scw
PDB file : Tito_Scwrl_4RLJ.pdb: