Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQIKIEGIHDDRLHRPLQNIANLFYEECELAYGGEEPADFVISLALSQTDEHVTVSGEVKGTGIKEQHTKFFSPDMTEKEAFKQVKNTISYVYLNLLQAHTGITQKWGILTGIRPTKLLHKKLQSGMSKEQAHAELKKDYLIHDEKIMLMQEIVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKEHDVKVTTIYFGGGTPTS-ITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNKYDIDRISINPQSYENETLKAIGR---HHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKEFRHSLSETEKL------MPESLTVHTLSFKRASEMTRNKHKYKVAGREEVSQMMEDAVAWTKEHGYVPYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASKFIDRDTGKITHFANPKDPKSYNERFEHYTDEKIKYLEQIFEKTTKQH 4RTB Chain:A ((107-344)) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ICINNCSYCSFRRENKEL--SRVRLSLEEAVDEAKAIRE----MG--HTRILLVMGEEPEDKTLSYLEEIIPAIYSEVD-----I-RRINV-NIAPLTLKGYERLKKLKIGTYQLFQESYNPEVYREVHLDGPKTNFLWRLNAVERAIEAGIDDIGIGALFGLG-DPLFELLGVIAHADYLKKKFGIGPHTVSVPRLKPALNSVFSNDY----KISDHKFKKIVALLRIMLPYTG--------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 4RTB.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 927 -82299 -88.78 -401.46 target 2D structure prediction score : 0.71 Monomeric hydrophicity matching model chain A : 0.60 3D Compatibility (PKB) : -88.78 2D Compatibility (Sec. Struct. Predict.) : 0.71 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.391

(partial model without unconserved sides chains): PDB file : Tito_4RTB.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4RTB-query.scw PDB file : Tito_Scwrl_4RTB.pdb: