Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGGHWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGARTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLATPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN---- |
| 1K3R Chain:A ((1-262)) | -------------------MNRVDLSLFIPDSLTAETGDLKIKTYKVVLIARAASIFGVKRIVIYHDDADGEARFIRDILTYMD-----------------TPQYLRRKV-------------FPIMRELKHVGILPPLRTPH--------------------------------------HPTGKPVTGEYRQGLTVKRVKKG-------------TLVDIGADKLALCREKLTVNRIMSFRVVRLGKE-----ILIEPDEPEDRYWGYEVLDTRRNLAESLKTVGADVVVATSRNASPITSILDEVKTRMRGAREAAILFGGPYKGLPEIDAD-IWVNTLPGQCTETVR-----TEEAVLATLSVFNMLTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67120 for 2043 contacts (-32.9/contact) +
2D Compatibility (PS) -27829 + (NN) -16007 + (LL) 5620
1D Compatibility (HY) -2800 + (ID) 1500
Total energy: -109636.0 ( -53.66 by residue)
QMean score : 0.216
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