Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAAHGYTQQKDNYAKRLRRVEGQVRGIARMIEEDKYCIDVLTQISAVTSALRSVALNLLDEHLSHCVTRAVAEGGPGADGKLAEASAAIARLVRS----
2A3D Chain:A ((1-73))
MGSWAEFKQRLAAIKTRLQALGGSEAELAAFEKEIAAFESELQAYKG--------------------------KGNPEVE-ALRKEAAAIRDELQAYRHN
General information:
TITO was launched using:
RESULT:
Template:
2A3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20521 for 397 contacts (-51.7/contact) +
2D Compatibility (PS) -7496 + (NN) -2505 + (LL) 2364
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -31658.0 ( -79.74 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2A3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A3D-query.scw
PDB file :
Tito_Scwrl_2A3D.pdb
: