Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIGMICPYSFDVPGGVQSHVLQLAEVMRTRGHLVSVLAPASPHAALP-DY-FVSGGRAVPIPYNGSVARLRFGPATHRKVKKWLAHGDFDVLHLHEPNAPSLSMLALNIAE-GPIVATFHTSTTKSLTLTVFQGILRPMHEKIVGRIAVSDLARRWQMEALGS--DAVEIPNGVDVDSFASAARL------D--GYPRQGKTVLFLGRYDEPRKGMAVLLDALPKVVQRFPDVQLLIVGHGD-ADQLRGQAGRLAAHLRFLGQVDDAGKASAMRSADVYCAPNTG------GESFGIVLVEAMAAGTAVVASDLDAFRRVLRDGEVGHLVPV-DPPDLQAAALADGLIAVLENDVLRERYVAAGNAAV-RRYDWSVVASQIMRVYETVAGSGAKVQVAS |
| 3OKP Chain:A ((5-381)) | RKTLVVTNDFPPRIGGIQSYLRDFIATQD--PESIVVFASTQNAEEAHAYDKTLDYEV-IRWP---RSVMLP-TPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRL-VPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDK-----LSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251514 for 3010 contacts (-83.6/contact) +
2D Compatibility (PS) -38241 + (NN) -16334 + (LL) 1652
1D Compatibility (HY) -12800 + (ID) 4100
Total energy: -321337.0 ( -106.76 by residue)
QMean score : 0.542
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