Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEAPPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVLPSVNVAYIHAR-QSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPG------MAVFDLLDIEQLELLRGPQGTLFGKNTTAGVLNISTRAPTFTAERTVEVSGGQDGYFQGRGTVSGPLGETLAGRLSAYRTRDDGYIKNIHDDNYLNGGERQGARGQLLFEPNEDFSLRWIADYNEEDSSNGSMVVYGGAERFWQRAALVGASPLRDPQRRKVNINGRQHVSVHQGGSSLEANWNLAGGYRLTSISAYRYWHFTPANDEQLNVSAINDTGVEVHDRQFSQEIRLASPTGGAFDYVVGAYAFRQNLGNKTFTSYGPLADLYLLGANLGALNDTYSKANGKIETDSFALFAQGTWHLTERLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQYNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGPERANDAELGLKSTLFDRRLLLNANLFWTGIHGYQATTLYQAPGSTQLVQVLANAGSVRSRGLEFEATALPLRGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLDN---SDLSKIDGYALVNLAAGLRSDLGDGQLDTSVWLKNAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF |
| 2GUF Chain:A ((2-594)) | --------------------------------------------------------DTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDIT-----QLSSIFIRGTNAS--------HVLVLIDGVRLNLAGVSGSADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEP--GTEISAGWGSNSYQNYDVSTQQQLGDKTRVTLLGDYAHTH------------DGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRTNY-----------------------------------DTRKLYSQSWDAGLRYNGELIK-SQ--LITSYSHSKDYN-YDPH-YGR-YDSSATLDEMKQYTVQWANNVIV-GHGSIGAGVDWQKQTTTPGTG------------------------YVEDGYDQRNTGIYLTGLQQV-GDFTFEGAARSDDNSQF-------------------------------------GRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQLYGF-----YGNPNLDPEKSKQWEGAFEGLT--AGVNWRISGYRNDVSDLIDYDDH--------TLKYYNEGKARIKGVEATANFDTG-PLTHTVSYDYVDARNAI----------------------TDTPLLRRAKQQVKYQLDWQLY-----DFDWGITYQYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVT---SHLTVRGKIANLFDKDY-----------------AGREYTLSGSYTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 84831 for 4564 contacts (18.6/contact) +
2D Compatibility (PS) -55001 + (NN) 237 + (LL) 10160
1D Compatibility (HY) -8000 + (ID) 4900
Total energy: 27327.0 ( 5.99 by residue)
QMean score : 0.153
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