Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEY-NGEMAKVKAMVDVGKVSWDVVEVE-SPELLRGCDEGLFERLDPARFGDPAQFVPGTF---SECGVATYVWSMVMAYDSTKLAR--APQSWADFWNVREFPGKRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNI-QWW-EAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGV-----KLA-IVWP----GSLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR |
| 1Q35 Chain:A ((2-312)) | ------------------------------NEVNVYSYRQ---PYLIEPMLKNFEKDTGIKVNIIFAD-GLVDRVKQEG-EL-SPADVLLTVDISRVMEIVNADLAQKIDSKVLE--K-NIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPE-YKGKVCVRSGKNSYNVSLFAAMIE----------HY-GIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGNSYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIE--PSAIV-KGWGT----F-KSDTIKLEDIAKNYEAALKLVDEVKFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86829 for 2471 contacts (-35.1/contact) +
2D Compatibility (PS) -31458 + (NN) -12252 + (LL) 5032
1D Compatibility (HY) -4000 + (ID) 2700
Total energy: -132207.0 ( -53.50 by residue)
QMean score : 0.403
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