Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESRILSLAALTVLE----LSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTL-DVEILR---L-RPD-----TRVGEFAAVLEVGAEFGARYVLV--AGND---------DDERRSADNFAALCDLARPLGLDPHLEFMPW---TGIRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLAR------------GVDGAERARLAIERTRALLARL |
| 3VYL Chain:A ((1-281)) | --MARIGIHSFVWSASSAQSELERTLANTRDAGFDLIEFSYLDPA-----------DVDIGRLAKRIADLGLGVAISIGLPADGDISSADKAVAARGVEILNQTIALTRDLGGRKVAGILSAGHGLQVEAPTRDQWNRSAAALAKVAETAKAAGVTLNLEIVNRFESNLLNTAAQGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAGKIGYVHIGESH-----------------RGFLGTGNIDFAAIFDALTAIGYADDLSFESFSSEIVDENLSKKTAIWRNLWTDNMALAKHARAFIGLGLETA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125489 for 1904 contacts (-65.9/contact) +
2D Compatibility (PS) -26299 + (NN) -9414 + (LL) 2132
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -168570.0 ( -88.53 by residue)
QMean score : 0.572
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