Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDRERLECFE
3FX3 Chain:A ((6-225))
---HEAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRN-TPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDC------EVTLPYDKMLIAGRLGMKPESLSRAFSRLKAAGVTV-KRNHAEIEDIALLRDYA
General information:
TITO was launched using:
RESULT:
Template:
3FX3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149371 for 1582 contacts (-94.4/contact) +
2D Compatibility (PS) -23112 + (NN) -11413 + (LL) 584
1D Compatibility (HY) -17200 + (ID) 2850
Total energy: -203362.0 ( -128.55 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3FX3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FX3-query.scw
PDB file :
Tito_Scwrl_3FX3.pdb
: