Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQQPDPCNAYHTDEQRWAAVLARDAAADGAFVYAVKTTGVYCRPSSSARRPRRENVEFFATAEAAEAAGYRPSRRAAGDRSLAAEQRAERVAQACRMIETAETPPALEALAARLGMSPFHFHRLFKAETGLTPKAYASAYRARRLRERLGQASASVTEAIYDSGFNSNSRFYESSSQRLGMRPRDYRDGGAGAAIRFAIGQCSLGAILVAQSQRGICAILLGEEPEPLLRELQDQFPRAQLLGGDADFERLVAQVVGFVESPQLGLDLPLDVR-GTAFQERVWQALREIPPGSTASYAQVAERIGAPRAVRAVAQACAANRIAVAIPCHRVVRRDGDISGYRWGVERKRELLRREERD |
1WRJ Chain:A ((2-149)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVYGLYKSPFGPITVAKNEKGFVMLDFCDCAERS------S-------LDNDYFTDFFYKLDLYFEGKKVDLTEPVDFKPFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKT--SPRAVGTALSKNNVLLIIPCHRVIGEK-SLGGYSRGVELKRKLLELEGID |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WRJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94613 for 1124 contacts (-84.2/contact) +
2D Compatibility (PS) -15938 + (NN) -10919 + (LL) 14112
1D Compatibility (HY) -13200 + (ID) 2150
Total energy: -122708.0 ( -109.17 by residue)
QMean score : 0.573
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