Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATLMQLRAALEDGQARGLKQLSRQVDAPPALVEAILERLIALGKVERVAAQSSGGCGGGCKGCAQRDPCAEPEPYFRLR
2PN6 Chain:A ((6-50))
----LRILKILQYNAKYSLDEIAREIRIPKATLSYRIKKLEKDGVIKGY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22125 for 247 contacts (-89.6/contact) +
2D Compatibility (PS) -5175 + (NN) -4681 + (LL) 1008
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -34123.0 ( -138.15 by residue)
QMean score : 0.845
(partial model without unconserved sides chains):
PDB file :
Tito_2PN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PN6-query.scw
PDB file :
Tito_Scwrl_2PN6.pdb
: