Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
4AZQ Chain:A ((4-138))
MASLKDLEGKWRLMESHGFEEYMKELGVGLALRKMAAMAKPDCIITCDGNNITVKTESTVKTTVFSCNLGEKFEETTADGRKTETVCTFQDGALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTRVYEKVQ
General information:
TITO was launched using:
RESULT:
Template:
4AZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43353 for 994 contacts (-43.6/contact) +
2D Compatibility (PS) -15053 + (NN) -3121 + (LL) 0
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -84177.0 ( -84.69 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_4AZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZQ-query.scw
PDB file :
Tito_Scwrl_4AZQ.pdb
: