Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
4IB7 Chain:A ((1-162))
----------------LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENDECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMEN-----QSLVCQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
General information:
TITO was launched using:
RESULT:
Template:
4IB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116264 for 1190 contacts (-97.7/contact) +
2D Compatibility (PS) -16203 + (NN) 1909 + (LL) 2024
1D Compatibility (HY) -24000 + (ID) 7750
Total energy: -160284.0 ( -134.69 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_4IB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IB7-query.scw
PDB file :
Tito_Scwrl_4IB7.pdb
: