Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2QRZ Chain:A ((1-189))
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCV--
General information:
TITO was launched using:
RESULT:
Template:
2QRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131399 for 1496 contacts (-87.8/contact) +
2D Compatibility (PS) -20205 + (NN) -10744 + (LL) 352
1D Compatibility (HY) -27200 + (ID) 9450
Total energy: -198646.0 ( -132.78 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_2QRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRZ-query.scw
PDB file :
Tito_Scwrl_2QRZ.pdb
: