Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1EJ1 Chain:A ((9-190))
-----------------------------------KHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKS----KNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1EJ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86750 for 1372 contacts (-63.2/contact) +
2D Compatibility (PS) -19073 + (NN) -10807 + (LL) 1396
1D Compatibility (HY) -25600 + (ID) 8850
Total energy: -149684.0 ( -109.10 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1EJ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJ1-query.scw
PDB file :
Tito_Scwrl_1EJ1.pdb
: