Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1EJ1 Chain:A ((9-190))
-----------------------------------KHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKS----KNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1EJ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87364 for 1372 contacts (-63.7/contact) +
2D Compatibility (PS) -19028 + (NN) -10375 + (LL) 1296
1D Compatibility (HY) -25600 + (ID) 8900
Total energy: -149971.0 ( -109.31 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_1EJ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJ1-query.scw
PDB file :
Tito_Scwrl_1EJ1.pdb
: