Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2ZI7 Chain:A ((40-279))
--------------------IKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQST-------------GGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTL---------VPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108483 for 1707 contacts (-63.6/contact) +
2D Compatibility (PS) -22990 + (NN) -6831 + (LL) 1932
1D Compatibility (HY) -31600 + (ID) 10350
Total energy: -178322.0 ( -104.47 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI7-query.scw
PDB file :
Tito_Scwrl_2ZI7.pdb
: