Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAGRLFLSRLRAPFSSMAKSPLEGVSSSRGLHAGRGPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGTQKACTAQSLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFVKNL |
| 1J90 Chain:A ((18-212)) | -----------------------------------TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNG------------VNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTN-------KKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESI--HVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWL------IHQRRPQSCKVLVLDADLNLE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88095 for 1500 contacts (-58.7/contact) +
2D Compatibility (PS) -20747 + (NN) -8733 + (LL) 6172
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -131403.0 ( -87.60 by residue)
QMean score : 0.243
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