Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK
2Y81 Chain:A ((1-233))
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2Y81.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143555 for 2024 contacts (-70.9/contact) +
2D Compatibility (PS) -25564 + (NN) -9236 + (LL) 904
1D Compatibility (HY) -32000 + (ID) 11650
Total energy: -221101.0 ( -109.24 by residue)
QMean score : 0.735
(partial model without unconserved sides chains):
PDB file :
Tito_2Y81.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y81-query.scw
PDB file :
Tito_Scwrl_2Y81.pdb
: