Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPSNITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADAALHEPMYLFLAMLATIDLVLSSTTLPKMLAIFWFRDQEINFFACLVQMFFLHSFSIMESAVLLAMAFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPLPFLLRRFHYCRGPVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAMFIVVLDLLFVILSYVFILQAVLQLASQEARYKAFGTCVSHIGAILSTYTPVVISSVMHRVARHA--------AP--RVHILLAIFYLLFPPMVNPIIYGVKTKQIREYVLSLFQRKNM
2LNL Chain:A ((38-323))------------------------NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP----NNSSPVCYEVLGND----TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM-GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG-


General information:
TITO was launched using:
RESULT:

Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -267798 for 2005 contacts (-133.6/contact) +
2D Compatibility (PS) -26883 + (NN) 1015 + (LL) 1848
1D Compatibility (HY) -22000 + (ID) 2400
Total energy: -316218.0 ( -157.71 by residue)
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_2LNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LNL-query.scw
PDB file : Tito_Scwrl_2LNL.pdb: