Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLDSFFSFLLKSLIMALSNSSWRLPQPSFFLVGIPGLEESQHWIALPLGILYLLALVGNVTILFIIWMDPSLHQSMYLFLSMLAAIDLVVASSTAPKALAVLLVRAQEIGYTVCLIQMFFTHAFSSMESGVLVAMALDRYVAICHPLHHSTILHPGVIGHIGMVVLVRGLLLLIPFLILLRKLIFCQATIIGHAYCEHMAVVKLACSETTVNRAYGLTVALLVVGLDVLAIGVSYAHILQAVLKVPG-----------NEARLKAFSTCGSHVCVILVFYIPGMFSFLTHRFGHHV----PHHVHVLLAILYRLVPPALNPLVYRVKTQKIHQ |
2KS9 Chain:A ((32-314)) | -----------------------------------------IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTTET-----MPSRVVCMIEWPEH---PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -248123 for 2127 contacts (-116.7/contact) +
2D Compatibility (PS) -27362 + (NN) -9484 + (LL) 3912
1D Compatibility (HY) -24000 + (ID) 2650
Total energy: -307707.0 ( -144.67 by residue)
QMean score : 0.212
|
|
|