Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIPGLEGLHTWISIPFSFMYIVAVAGNIFLIFLIMTERSLHEPMYLFLSMLASADFLLATAAAPKVLAILW-FHSMDISFGSCVSQMFFIHFIFVAESAILLAMAFDRYVAICYPLRYT-IL---TSSAVRKIGIAAVVRSFFICCPFIFLVYRLTYCGRNIIPHSYCEHIARLACGNINVNIIYGLTVALLSTGLDIVLIIISYTMILHSVFQISSW-------------------------------------------------------------------------------------------------------------------------------------------------------------------AARFKALSTCGSHICVIFMFYTPAFFSFLAHRFGGK-TIPHHIHILVGSLYVLVPPMLNPIIYGVKTKQIKDRVILLFSPISVC |
| 3PBL Chain:A ((41-472)) | ------------YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT-------GDPTVCSI--------SN--PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPEL-YSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296616 for 2012 contacts (-147.4/contact) +
2D Compatibility (PS) -26940 + (NN) -6387 + (LL) 1868
1D Compatibility (HY) -19200 + (ID) 2550
Total energy: -349825.0 ( -173.87 by residue)
QMean score : 0.272
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