Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMASERNQSSTPTFILLGFSEYPEIQVPLFLVFLFVYTVTVVGNLGMIIIIRLNSKLHTIMCFFLSHLSLTDFCFSTVVTPKLLENLVVEYRTISFSGCIMQFCFACIFGVTETFMLAAMAYDRFVAVCKPLLYTTIMSQKLCALLVAGSYTWGIVCSLILTYFLLDLSFCESTFINNFICDHSVIVSASYSDPYISQRLCFIIAIFNEVSSLIIILTSYMLIFTTIMKMRSASGRQKTFSTCASHLTAITIFHGTILFLYCVPNP----K----T-SSL-IVT--VASVFYTVAIPMLNPLIYSLRNKDINNMFEKLVVTKLIYH
2LNL Chain:A ((39-323))-------------------------KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFR-Q-AY-H-PNNSSPVCYEVLGN---D-TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH-MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG---


General information:
TITO was launched using:
RESULT:

Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209960 for 1988 contacts (-105.6/contact) +
2D Compatibility (PS) -26299 + (NN) 5176 + (LL) 3140
1D Compatibility (HY) -23200 + (ID) 2000
Total energy: -253143.0 ( -127.34 by residue)
QMean score : 0.195

(partial model without unconserved sides chains):
PDB file : Tito_2LNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LNL-query.scw
PDB file : Tito_Scwrl_2LNL.pdb: