Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRSNHTVTEFILLGFTTDPGMQLGLFVVFLGVYSLTVVGNSTLIVLICNDSHLHTPMYFVVGNLSFLDLWYSSVYTPKILVICISEDKSISFAGCLCQFFFSAGLAYSECCLLAAMAYDRYVAISKPLLYAQAMSIKLCALLVAVSYCGGFINSSIITKKTFSFNFCCENIIDDFFCDLLPLVKLACGEKGCYKFLMYFLLASNVICPAVLILASYLFIITSVLRISS--------SQGRLKAFSTCSSHLTSVTLYYGSILYIYALPRSSY---SFDMDKIVSTFYTEVLPMLNPMIYSLRNKDVKEALKKLLP |
1U19 Chain:A ((39-323)) | ---------------------QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMALACAAPPLVGWSR----YIPEGMQCSCGIDYYTPHE--ETNNESFVIYMF-VVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190628 for 2227 contacts (-85.6/contact) +
2D Compatibility (PS) -27002 + (NN) 2751 + (LL) 1636
1D Compatibility (HY) -9200 + (ID) 800
Total energy: -223243.0 ( -100.24 by residue)
QMean score : 0.144
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