Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNASNDSQSEDCETRQWLPPGESPAISSVMFSAGVLGNLIALALLARRWRGDVGCSAGRRSSLSLFHVLVTELVFTDLLGTCLISPVVLASYARNQTLVALAPESRACTYFAFAMTFFSLATMLMLFAMALERYLSIGHPYFYQRRVSRSGGLAVLPVIYAVSLLFCSLPLLDYGQYVQYCPG-------TWCFIRHGRT-AY--LQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSL--------------------GS--------G------------------------------------------------------------------------------RG-----------------GPG-----------ARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSS----RKEKWDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL |
| 3EML Chain:A ((20-472)) | -------------------GSSVYITVELAIAVLAILGNVLVCWAVWLN-----------SNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST---GFCA---ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ---SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256341 for 2183 contacts (-117.4/contact) +
2D Compatibility (PS) -30979 + (NN) -12957 + (LL) 2304
1D Compatibility (HY) -24800 + (ID) 2500
Total energy: -325273.0 ( -149.00 by residue)
QMean score : 0.322
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