Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITFLPIIFSILVVVTFVIGNFANGF-----IALVNSTEWVKRQKISF----ADQIVTALAVSRVGLLWVLLLNWYSTVLNPAFCSVELRTTAYNIWAVTGHFSNWPATSLS---IFYLLKIANFSNLIFLRLKRRVKSVI---LVVLLGPLLFLACHLFVVNMNQIVWTKEYEGN--------------MTWKIKLRRAMYLSDTTVTMLA-NLVP-FTVTLISFL----LLVCSLCKH---------------LKKMQLHGKGSQDPSTKVHIKVLQT--------VISFFLLRAIYFVSVIISVWSFKNLENKPVFMFCQAIGFSCSSAHPFILIWGNKKLKQT--YLSVLWQMRY |
| 2W0C Chain:L ((1-335)) | ----------MIVKKKLAAGEFAETFKNGNNITIIKAVGELVLRAYGADGGEGLRTIVRQGVSIKGM------NYTSVMLHTEY------AQEIEYWVGDLDYSFQEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEAGQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQ-HDWYDESFTTFIEVYSDDPLLTVKGYAQILMERT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146792 for 1766 contacts (-83.1/contact) +
2D Compatibility (PS) -28665 + (NN) 12684 + (LL) 3032
1D Compatibility (HY) -4400 + (ID) 2350
Total energy: -166491.0 ( -94.28 by residue)
QMean score : 0.013
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