Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAASSLEQKLSRLEAKLKQENREARRRIDLNLDISPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPARPRHMLGLPSTLFTPRSMESIEIDQKLQEIMKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC--PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK-----------NCKTD----FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRTSGVLSQPHLPFFR |
2Y4I Chain:C ((68-377)) | ---------------------------------------------------------------------------------------------------------------------DDFEKISELGAG---VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-VGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC---PMAIFELLDYIVNEPPPKLPSAV-FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGL------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172462 for 2005 contacts (-86.0/contact) +
2D Compatibility (PS) -27438 + (NN) -15188 + (LL) 7192
1D Compatibility (HY) -31200 + (ID) 5950
Total energy: -245046.0 ( -122.22 by residue)
QMean score : 0.468
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