Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVVSMLAPCIMYAT----GRVSAP-----TGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMG-------G---LR----------PDLVAGI--PSKCGVNIPYAISPSTDCSRVH
1BEA Chain:A ((15-110))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48376 for 394 contacts (-122.8/contact) +
2D Compatibility (PS) -6510 + (NN) 188 + (LL) 1696
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -56402.0 ( -143.15 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: