Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCTPTQLTPCAPAIVGNSPPTAACCGKL----KAHPASCFCQYKKDPNMKKYVNSPNGKKVFAT-CKVPLP---KC---
1HYP Chain:? ((6-80))
PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19213 for 388 contacts (-49.5/contact) +
2D Compatibility (PS) -6508 + (NN) -4170 + (LL) 132
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -35959.0 ( -92.68 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: