Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------AGCNPSALSPCMSAIMLGAAPS------PGCCVQLRAQQPCLCQYARDPSYRSYVTSPSAQRAVKACNVKANC------------------------------------------------------------ |
| 1HQV Chain:A ((8-188)) | PGPGGGPGPAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNS--GMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12973 for 300 contacts (-43.2/contact) +
2D Compatibility (PS) -6602 + (NN) 783 + (LL) 192
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -23500.0 ( -78.33 by residue)
QMean score : 0.270
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