Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPPPVQCDPGKLSACAVPIFFGTAPSKSCCSNLR---AQEKDGCFCQYARDPMYASYINSTNARNTIAA-CGIAFP---SC---
1HYP Chain:? ((6-80))
-----PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28288 for 395 contacts (-71.6/contact) +
2D Compatibility (PS) -6595 + (NN) -143 + (LL) -260
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -39686.0 ( -100.47 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: