Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVKPQPCACKYFIKNPVLLPRLLIACRVPHPKC
1HCR Chain:A ((1-52))
GRPRAINKH-----EQEQISRLLE--KG-----------HPRQQLAIIFGIGVS-TLYRYFPASSIKKRMN
General information:
TITO was launched using:
RESULT:
Template:
1HCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21385 for 224 contacts (-95.5/contact) +
2D Compatibility (PS) -4457 + (NN) -661 + (LL) 1184
1D Compatibility (HY) -400 + (ID) 500
Total energy: -26219.0 ( -117.05 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_1HCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HCR-query.scw
PDB file :
Tito_Scwrl_1HCR.pdb
: